Dec.2024 11
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Novel andeffective plasmid transfection protocols for functional analysis of genetic elements in humancardiac fibroblasts-Nov.2024

Introduction
This study develops an optimized plasmid transfection protocol for primary human cardiac fibroblasts, aiming to improve gene transfer efficiency and minimize toxicity. Despite an efficiency below 5%, the protocol supports experiments like luciferase assays and allows profiling of fibroblast and cardiac fibroblast markers (VIM, TCF21). The findings provide a valuable tool for advancing cardiovascular research.
Details

Introduction
This study aims to develop an optimized plasmid transfection protocol for human cardiac fibroblasts (HCFs), a cell type that has been difficult to genetically manipulate. The researchers conducted a thorough screening of transfection reagents and 150 conditions to identify a method that achieves high efficiency with minimal toxicity. The protocol was successfully applied in luciferase enhancer-promoter assays to identify key genetic elements in HCFs. The study's objectives include optimizing the transfection method, understanding the mechanisms behind cytotoxicity, and enabling functional analysis of genetic elements in HCFs. This approach could advance cardiac fibroblast biology and open new opportunities for targeted genetic manipulations in cardiac research and therapy.















Results
Chemical transfection into primary human cardiac fibroblasts

This study aimed to develop a suitable plasmid transfection protocol for human cardiac fibroblasts (HCFs). After expanding the HCFs to passage 8–9, the researchers tested 12 commercially available chemical transfection reagents (R2 to R13). Transfection efficiency was assessed by GFP fluorescence, showing that R3 (17.65%) and R4 (21.7%) had the highest efficiencies, while others had less than 5%. Cell viability was also evaluated using propidium iodide (PI) staining, with R7 (14.05%) and R12 (13.53%) showing the lowest cell death, compared to R3 (23.47%). Based on these results, R7 and R12 were selected for further optimization, with R4 kept as a potential candidate despite lower cell viability due to its high transfection efficiency.

 Effect of plasmid purification methods on fibroblast viability
The impact of different plasmid purification methods (M1-M8) on human cardiac fibroblast (HCF) viability after transfection with R4-mediated plasmids. Results showed that plasmids purified with methods M1-M8 led to a ~50% reduction in cell viability compared to non-transfected controls, with M7 showing slightly better survival rates. LDH release indicated greater cytotoxicity from M1, M2, and M8 compared to other methods. Gel electrophoresis showed that M7 and M8 had lower yields of desired products compared to the centrifugation-based M6 method. Transfecting cells with plasmid alone did not affect viability, but R4-plasmid complexes significantly decreased survival, regardless of transgene expression. Increasing plasmid concentration led to a proportional decrease in viability. Adding E. coli RNA or LPS did not cause cytotoxicity, except at high concentrations. DNase I treatment improved survival rates, suggesting that nucleic acids rather than impurities were more detrimental to viability. The study also identified an upregulation of inflammatory cytokines and DNA sensors (CGAS and STING) as a result of transfection. Based on these findings, M5 was selected for larger-scale optimizations, and M3 for small-scale experiments.

 Exploration of parameters affecting gene transfer into fibroblasts
This study systematically evaluated 100 conditions for R4, 45 for R12, and 9 for R7 to optimize the plasmid transfection protocol. Key findings included that the timing of media changes significantly affected gene delivery. For R4, the highest luciferase activity occurred when changing the media 4 hours post-transfection. For R12, increasing R7 volume and optimal media change timing (4-8 hours) improved luminescence. R7 showed peak luminescence with 100 ng plasmid and 0.30 μl reagent at 8 hours. A trade-off between transfection efficiency and cell viability was observed, with a negative correlation between luciferase activity and cell survival. The P26 combination was chosen as the optimal condition, providing the best balance of viability and gene delivery, with sustained high expression for 24-72 hours.

Promoter assay using human primary cardiac fibroblasts
The optimized gene delivery methodology was demonstrated using a plasmid-based promoter assay, testing four ubiquitous promoters (CMV, CBh, nEF, CAG) and newly reconstructed regulatory regions for VIM and TCF21 fibroblast markers. Among the ubiquitous promoters, CAG showed the highest activity (303.6-fold), followed by CMV (216.9-fold). The VIM regulatory region exhibited a remarkable 350-fold activation, while TCF21 showed a 120-fold increase. When switching transfection reagents, activity remained strong but decreased, with R4 and R12 still showing notable expression. The methodology also applied to human fibroblasts from lung, kidney, and skin, showing high activity for DDR2 and DCN markers. Overall, the optimized protocol efficiently captures endogenous transcriptional activities in primary human fibroblasts and provides a powerful tool for studying gene regulation in fibroblast function and cardiac disease.

Discussion

The study presents the first optimized plasmid-based gene introduction protocol for primary human cardiac fibroblasts (HCF), offering an alternative to viral vector systems. While viral vectors typically provide high expression levels, they require complex production and may introduce confounding effects from viral sequences. The optimized plasmid method, using purified plasmids from tube-scale E. coli cultures, demonstrated similar cell viability and robust gene expression, with luciferase assays showing significant upregulation (100–350 times background). The method was versatile, enabling sustained gene expression for up to 72 hours, making it ideal for medium-term reporter assays and signaling pathway investigations.

Key protocol parameters include maintaining a seeding density of 1.82 x 10^4 cells/cm², which ensures optimal proliferation and reproducibility during experiments. The study also optimized timing for media changes and reagent use, with the Viafect (R12) reagent achieving maximum luciferase activity from 48–96 hours post-seeding, and Lipofectamine 3000 (R7) showing peak activity at 48 hours post-transfection.

Furthermore, the study addressed potential challenges in plasmid introduction, such as inflammatory cytokine induction and apoptosis from overexpressed foreign proteins, E. coli-derived components, or plasmid-related factors, providing insights into minimizing cell toxicity. The methodology is applicable to experiments investigating fibroblast function, gene regulation, and cardiac disease.

URL Link:
Novel and effective plasmid transfection protocols for functional analysis of genetic elements in human cardiac fibroblasts | PLOS ONE


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